Search results for "Bit array"

showing 2 items of 2 documents

Spatially-induced nestedness in a neutral model of phage-bacteria networks

2017

[EN] Ecological networks, both displaying mutualistic or antagonistic interactions, seem to share common structural traits: the presence of nestedness and modularity. A variety of model approaches and hypothesis have been formulated concerning the significance and implications of these properties. In phage-bacteria bipartite infection networks, nestedness seems to be the rule in many different contexts. Modeling the coevolution of a diverse virus¿host ensemble is a difficult task, given the dimensionality and multi parametric nature of a standard continuous approximation. Here, we take a different approach, by using a neutral, toy model of host¿phage interactions on a spatial lattice. Each …

0106 biological sciences0301 basic medicineComputer sciencevirus–host interactionsVirus host interactionsBiologyBit array010603 evolutionary biology01 natural sciencesMicrobiology03 medical and health sciencesVirologyCoevolutionContinuous approximationMulti parametricToy modelEcologyNested networksEcological network030104 developmental biologyBipartite graphNestednessMatching allele dynamicsBiological systemNeutral modelResearch ArticleCurse of dimensionalityCoevolution
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Organization and evolution of synthetic idiotypic networks

2012

We introduce a class of weighted graphs whose properties are meant to mimic the topological features of idiotypic networks, namely the interaction networks involving the B-core of the immune system. Each node is endowed with a bit-string representing the idiotypic specificity of the corresponding B cell and a proper distance between any couple of bit-strings provides the coupling strength between the two nodes. We show that a biased distribution of the entries in bit-strings can yield fringes in the (weighted) degree distribution, small-worlds features, and scaling laws, in agreement with experimental findings. We also investigate the role of ageing, thought of as a progressive increase in …

Condensed Matter Physics; Statistical and Nonlinear Physics; Statistics and ProbabilityTime FactorsTime FactorDistribution (number theory)Molecular Networks (q-bio.MN)FOS: Physical sciencesBit arrayThermodynamicComputer GraphicsCluster AnalysisHumansQuantitative Biology - Molecular NetworksMathematicsDiscrete mathematicsB-LymphocytesCluster AnalysiDegree (graph theory)Percolation (cognitive psychology)B-LymphocyteModels ImmunologicalGraph theoryDisordered Systems and Neural Networks (cond-mat.dis-nn)Condensed Matter - Disordered Systems and Neural NetworksComputer GraphicDegree distributionFOS: Biological sciencesImmune SystemCore (graph theory)ThermodynamicsNode (circuits)Human
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